1. CCAST User Guide
  2. Using Intel Compilers on HPC Clusters
  3. Center for Computationally Assisted Science and Technology
  4. Statistical Consulting
  5. Logging into CCAST using SSH
  6. Creating Python Virtual Environments
  7. Installing R Packages in your Home Directory
  8. Advanced Research Computing Training Program
  9. Statistical Consulting - Services and Support
  10. Advanced Networks
  11. Bioinformatics - BCFtools
  12. Running Bioinformatics Software on HPC Clusters
  13. CCAST Usage Policies
  14. Bioinformatics - BLAST+
  15. Using Intel Math Kernel Library (MKL) on HPC Clusters
  16. Bioinformatics - SortMeRNA
  17. Bioinformatics - ClustalW-MPI
  18. Bioinformatics - Canu
  19. Bioinformatics - ABySS
  20. Bioinformatics - Trinotate
  21. Bioinformatics - MaSuRCA
  22. Bioinformatics - StringTie
  23. Bioinformatics - MEGAHIT
  24. Bioinformatics - RepeatMasker
  25. Highlights - Mapping and Cloning Disease Resistance Genes in Barley and Wheat
  26. Bioinformatics - FastQC
  27. Bioinformatics - FSA
  28. Bioinformatics - Trinity
  29. Bioinformatics - Velvet
  30. Open OnDemand - A Graphical Application (RELION)
  31. Bioinformatics - Trimmomatic
  32. Bioinformatics - Maq
  33. Open OnDemand - How to Access
  34. Bioinformatics - SOAPdenovo-Trans
  35. Highlights - Computational Fluid Modeling of Floods
  36. Bioinformatics - Ragout
  37. Bioinformatics - Transrate
  38. Bioinformatics - Meraculous-2D