1. Center for Computationally Assisted Science and Technology (CCAST)
  2. Statistical Consulting
  3. Advanced Networks
  4. CCAST Advanced Research Computing Training
  5. CCAST User Guide
  6. CCAST Usage Policies
  7. Open OnDemand - How to Access
  8. Open OnDemand - A Graphical Application (RELION)
  9. Running Bioinformatics Software on HPC Clusters
  10. Bioinformatics - MEGAHIT
  11. Using Intel Compilers on HPC Clusters
  12. Bioinformatics - BCFtools
  13. Bioinformatics - ABySS
  14. Bioinformatics - BLAST+
  15. Bioinformatics - Canu
  16. Bioinformatics - ClustalW-MPI
  17. Bioinformatics - FastQC
  18. Bioinformatics - FSA
  19. Bioinformatics - Maq
  20. Bioinformatics - MaSuRCA
  21. Bioinformatics - Meraculous-2D
  22. Bioinformatics - Ragout
  23. Bioinformatics - RepeatMasker
  24. Bioinformatics - RMAP
  25. Bioinformatics - SOAPdenovo-Trans
  26. Bioinformatics - SOAPdenovo2
  27. Bioinformatics - SortMeRNA
  28. Bioinformatics - StringTie
  29. Bioinformatics - Transrate
  30. Bioinformatics - Trimmomatic
  31. Bioinformatics - Trinity
  32. Bioinformatics - Trinotate
  33. Bioinformatics - Velvet
  34. Logging into CCAST using SSH
  35. Installing R Packages in your Home Directory
  36. Creating Python Virtual Environments
  37. Statistical Consulting - Services and Support